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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855097.1_cds_XP_016512739.1_25353
CDS Infomation

[gene=LOC107829786] [db_xref=GeneID:107829786] [protein=vacuolar protein sorting-associated protein 18 homolog] [frame=3] [partial=5'] [protein_id=XP_016512739.1] [location=complement(join(1897..2025,4515..4574,5413..5469,5617..5736,5829..5972,11351..11495,11751..11852,12752..12819,13644..13739,13931..14070,14184..>14396))] [gbkey=CDS]
Sequence

ATAGATCTTTCTGTTGGCAGGCCTGGGGAACAATCTGTTCATAAGGTTTTCGTTGACCCT
GGAGGGAGTCACTGTATTGCCACTGTTATTGGCAGTAGTGGTACCGATACATATTATACT
CATGCTAAATGGACAAAGCCTCGAATTTTAAGCAAATTAAAAGGTCTTGTTGTCAATGCT
GTTGCCTGGAATAGACAGCATATAACAGAAGCTTCAACTAGAGAAATCATTATGGGCACG
GACAATGGCCAACTTTGTGAGATGGCTGTAGATGTAAAGGATAAAATGGAGAAGTACGTA
AAGTTACTGTTTGAACTTAAAGAACTACCTGAGGCTTTCACCGGTTTGCAGATGGAAACA
GCAAATGTGCACAATGGTACCAGATTTTATGTGATGGCTGTTACACCTACTCGACTTTAT
TCGTTCACAGGGATTGGCTCGCTTGAAGCTGTTTTTGCAAGCTATGTGGACCGTACAGTT
CATTTCATGGAACTTCCTGGTGAAATACCTAACAGTGAACTGCACTTTTTTATCAAGCAA
AGGAGGGCTGTACACTTCGCATGGCTTTCTGGAGCAGGAATCTACCATGGTGACCTAAAA
TTTGGAGTGCAACATAGTTCGCCAAACGGGGATGAAAACTTTGTGGAAAACAAAGCTCTT
CTAGACTACTCTAAATTCTCTGAAGGAGTTGAAGGTGTCAAACCTAGCTCTCTGGCTGTA
TCCGAGTTTCATTTCCTACTTCTCATAGGTAACAAGGTTAAGGTGGTGAACAGGATAAGT
GAACAAATAGTAGAAGAACTTTATTTTGATCAGACACCTGACGCAGTTTCAAGAGGTATT
TTTGGCTTATGTAGTGATGCCTCAGCTGGGTTGTTTTATGCATATGACCAAAATTCCATC
TTCCAGGTGTCTGTAAATGATGAAGGCCGTGACATGTGGAAAGTGTACTTGGACTTAAAA
GAATATGCTGCAGCTTTGGCTAATTGTCGTGATGCCCTGCAGAGAGACCAAGTTTATCTG
GTTCAGGCTGAAGCTGCTTTTGCTGCCAAGGAGTTCCTCAGAGCTGCATCATTCTATGCA
AAAATTAACTATGTGTTATCATTTGAAGAGATCTCATTGAAGTTCATTAGCATAAGTGAA
CAGGATGCATTGAGAACATTTCTCCTGCGGAAGCTTGATAATCTTTCAAAGGATGAAAAG
TGCCAAATAACAATGATTTCCACATGGGCAACTGAATTATATCTTGATAAGGTTCATCTC
TTTTTGAACTGA

Peptide Sequence

PEP ID

XP_016512739.1
PEP Infomation

PREDICTED: vacuolar protein sorting-associated protein 18 homolog, partial [Nicotiana tabacum]
Sequence

IDLSVGRPGEQSVHKVFVDPGGSHCIATVIGSSGTDTYYTHAKWTKPRILSKLKGLVVNA
VAWNRQHITEASTREIIMGTDNGQLCEMAVDVKDKMEKYVKLLFELKELPEAFTGLQMET
ANVHNGTRFYVMAVTPTRLYSFTGIGSLEAVFASYVDRTVHFMELPGEIPNSELHFFIKQ
RRAVHFAWLSGAGIYHGDLKFGVQHSSPNGDENFVENKALLDYSKFSEGVEGVKPSSLAV
SEFHFLLLIGNKVKVVNRISEQIVEELYFDQTPDAVSRGIFGLCSDASAGLFYAYDQNSI
FQVSVNDEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLVQAEAAFAAKEFLRAASFYA
KINYVLSFEEISLKFISISEQDALRTFLLRKLDNLSKDEKCQITMISTWATELYLDKVHL
FLN

Transcript Sequence

Gene sequence data has not been registered.